IBM Needs Your Help Studying the Human Microbiome

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iStock

Humans have been to the Moon and the deepest part of the ocean, but when it comes to understanding what goes on in our own bodies, there's much that still needs to be explored. The human microbiome, for instance, is made of up of trillions of microscopic organisms that dictate everything from our gut health to certain chronic diseases. Now, Boston Magazine reports that IBM is attempting to study the human microbiome like it's never been studied before, and they're calling on the public to help with the effort.

The goal of the initiative, dubbed the Microbiome Immunity Project, is to decode the genomes of the many bacteria living inside the human body. Scientists know that the micobiome is linked to some diseases, such as Type 1 diabetes, Crohn's disease, and ulcerative colitis. By analyzing the proteins these bacteria produce, researchers hope to get a better understanding of how these diseases happen and how to treat them at the microbial level.

To do this, scientists plan to study the proteins related to the 3 million unique bacterial genes of the human microbiome. For comparison, more than 20,000 genes were mapped for the Human Genome Project, and that undertaking lasted 13 years.

Technology has come a long way since that project was completed in 2003, but IBM will still need all the help they can get to make the Microbiome Immunity Project happen. In addition to collaborating with the Broad Institute of MIT and Harvard, Massachusetts General Hospital, University of California-San Diego, and the Flatiron Institute, IBM is calling on members of the public to donate their surplus computing power.

If you're interested in contributing to the citizen science project, you can sign up to join IBM's World Community Grid. From there, you'll be able to download a software program that detects when your computer has extra processing power to offer and uses it to run virtual experiments for the project. "Had World Community Grid not existed, we wouldn't have even contemplated this project," Rob Knight, director of the Center for Microbiome Innovation at UC-San Diego, said in a press statement. "By harnessing the efforts of volunteers, we can do something that exceeds the scale of what we have access to by a factor of thousands. For the first time, we're bringing a comprehensive structural biology picture to the whole microbiome, rather than solving structures one at a time in a piecemeal fashion."

IBM's software won't be able to access anything on your computer other than its processing power, and the company assures users that the system will be tested regularly for vulnerabilities. The crowdsourced computing program has been used to conduct research in areas such as cancer, HIV/AIDS, Zika, clean water, and renewable energy in the past. If IBM can get enough people to take part this time around, they plan to share their data publicly with other scientists working to study the microbiome's role in disease.

[h/t Boston Magazine]

Pioneering Heart Surgeon René Favaloro Is Being Honored With a Google Doodle

Dr. René Favaloro (left) pictured with colleague Dr. Mason Sones.
Dr. René Favaloro (left) pictured with colleague Dr. Mason Sones.
The Cleveland Clinic Center for Medical Art & Photography, Wikimedia Commons // CC BY 4.0

Argentinian heart surgeon René Favaloro is the subject of today’s Google Doodle, which features a sketched portrait of the doctor along with an anatomical heart and several medical tools, The Independent reports.

The renowned doctor was born on this day in 1923 in La Plata, the capital of Argentina’s Buenos Aires province, and pursued a degree in medicine at La Plata University. After 12 years as a doctor in La Pampa, where he established the area’s first mobile blood bank, trained nurses, and built his own operating room, Favaloro relocated to the U.S. to specialize in thoracic surgery at the Cleveland Clinic.

In 1967, Favaloro performed coronary bypass surgery on a 51-year-old woman whose right coronary artery was blocked, restricting blood flow to her heart. Coronary bypass surgery involves taking a healthy vein from elsewhere in the body (in this case, Favaloro borrowed from the patient’s leg, but you can also use a vein from the arm or chest), and using it to channel the blood from the artery to the heart, bypassing the blockage. According to the Mayo Clinic, it doesn’t cure whatever heart disease that caused the blocked artery, but it can relieve symptoms like chest pain and shortness of breath, and it gives patients time to make other lifestyle changes to further manage their disease.

Favaloro wasn’t keen on being called the “father” of coronary bypass surgery, but his work brought the procedure to the forefront of the clinical field. He moved back to Argentina in 1971 and launched the Favaloro Foundation to train surgeons and treat a variety of patients from diverse economic backgrounds.

Favaloro died by suicide on July 29, 2000, at the age of 77, by a gunshot wound to the chest. His wife had died several years prior, and his foundation had fallen deeply into debt, which Argentinian hospitals and medical centers declined to help pay, The New York Times reported at the time.

“As a surgeon, Dr. Favaloro will be remembered for his ingenuity and imagination,” his colleague Dr. Denton A. Cooley wrote in a tribute shortly after Favaloro’s death. “But as a man ... he will be remembered for his compassion and selflessness.” Today would have been his 96th birthday.

[h/t The Independent]

Forget Lab-Grown Meat—You Can Now Buy Lab-Grown Ice Cream

Deagreez/iStock via Getty Images
Deagreez/iStock via Getty Images

Even though “dairy-free” doesn’t necessarily mean “healthier,” it’s still a necessary disclaimer for dairy-free people who are screaming for ice cream. And between veganism, lactose intolerance, and other dietary dairy restrictions, the race is on to create an ice cream for the masses that doesn’t taste like chalk, chemicals, or sadness.

Bay Area startup Perfect Day may have just pulled ahead of the competition. Today, Fast Company reports, it released three flavors of dairy-free ice cream—Vanilla Salted Fudge, Milky Chocolate, and Vanilla Blackberry Toffee—that contain the same proteins found in cow dairy, but grown in a lab from engineered yeast and DNA. Since those proteins contribute greatly to the rich texture and taste of ice cream that we love so much, Perfect Day’s products are supposedly indistinguishable from the real thing.


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The co-founders, vegan bioengineers Ryan Pandya and Perumal Gandhi, got the idea from their experience in medicine, where fermentation is used to grow things in a lab all the time. “The two of us started scratching our heads and wondering, what if we just apply that same exact technology that’s been around for half a century to make the world’s most in-demand, highest-quality protein?” Pandya explained to Fast Company.

Their lactose-, dairy-, and gluten-free vegan ice cream, which they’ve been working on for five years, includes the dairy proteins casein and whey, as well as plant-based fats and sugar. If you're dairy-free because of a casein or whey allergy or sensitivity, you should treat this ice cream like you would any other foods containing dairy, and heed the "Contains milk protein" disclaimer on Perfect Day products.

Lab-grown dairy has environmental benefits too, considering that cows and other livestock are major culprits of greenhouse gas emissions. Pandya and Gandhi hope to sell their proteins to large-scale food manufacturers, and have teamed up with Archer Daniels Midland, an Illinois-based food processing company, to increase production.

Though it seems like a scoop or two of this ice cream might be the recipe for a perfect day, that wasn’t the inspiration behind the company’s name—the founders stumbled upon a study in which scientists discovered that cows produced more milk when listening to music, and one of the most successful songs was Lou Reed’s “Perfect Day.” “As a company on a mission to make cows, people, and the planet happier, it seemed like a perfect fit,” the website says.

Can’t wait to taste the magic? You can purchase all three flavors in a three-pint bundle for $60 here.

[h/t Fast Company]

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